PhilSci Archive

Items where Subject is "Specific Sciences > Biology"

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Number of items at this level: 388.

Preprint

Andrews, Mel (2020) The Math is not the Territory: Navigating the Free Energy Principle. [Preprint]

Arroyo-Santos, Alfonso and Olson, Mark E. and Vergara-Silva, Francisco (2013) Practice-oriented controversies and borrowed epistemic credibility in current evolutionary biology: phylogeography as a case study. [Preprint]

Arroyo-Santos, Alfonso and Olson , Mark E and Vergara-Silva, Francisco (2014) “Practice-Oriented Controversies and Borrowed Epistemic Credibility in Current Evolutionary Biology: Phylogeography as a Case Study. [Preprint]

Austin, Christopher J. (2016) Aristotelian Essentialism: Essence in the Age of Evolution. [Preprint]

Austin, Christopher J. (2015) The Dispositional Genome: Primus Inter Pares. [Preprint]

Austin, Christopher J. (2017) A Biologically Informed Hylomorphism. [Preprint]

Austin, Christopher J. (2016) Evo-Devo: A Science of Dispositions. [Preprint]

Austin, Christopher J. (2016) The Ontology of Organisms: Mechanistic Modules or Patterned Processes? [Preprint]

Austin, Christopher J. (2020) Organisms, Activity, and Being: On the Substance of Process Ontology. [Preprint]

Austin, Christopher J. (2017) Recent Work in The Philosophy of Biology. [Preprint]

Austin, Christopher J. and Nuño de la Rosa, Laura (2018) Dispositional Properties in Evo-Devo. [Preprint]

Ayala, Francisco (2008) What the Biological Sciences Can and Cannot Contribute to Ethics. [Preprint]

Bartlett, Steven James (2015) THE SPECIES PROBLEM AND ITS LOGIC: Inescapable Ambiguity and Framework-relativity. [Preprint]

Barwich, Ann-Sophie (2020) Imaging the living brain: Reductionism revisited in times of dynamical systems. [Preprint]

Batterman, Robert and Green, Sara (2020) Steel and bone: Mesoscale modeling and middle-out strategies in physics and biology. [Preprint]

Bechtel, William (2016) Diagrammatic reasoning. [Preprint]

Bechtel, William (2016) Enriching the Strategies for Creating Mechanistic Explanations in Biology. [Preprint]

Birch, Jonathan (2014) Gene mobility and the concept of relatedness. [Preprint]

Birch, Jonathan (2017) Animal Cognition and Human Values. [Preprint]

Birch, Jonathan and Browning, Heather (2020) Neural Organoids and the Precautionary Principle. [Preprint]

Bogen, Jim (2005) Regularities and Causality; Generalizations and Causal Explanations. [Preprint]

Bokulich, Alisa (2020) Understanding Scientific Types: Holotypes, Stratotypes, and Measurement Prototypes. [Preprint]

Bonnin, Thomas (2019) Evidential Reasoning in the Historical Sciences: Applying Toulmin Schemas to the case of Archezoa. [Preprint]

Bourrat, Pierrick and Lu, Qiaoying (2017) Dissolving the Missing Heritability Problem. [Preprint]

Brigandt, Ingo (2008) Beyond Reduction and Pluralism: Toward an Epistemology of Explanatory Integration in Biology. [Preprint]

Brigandt, Ingo (2009) The Epistemic Goal of a Concept: Accounting for the Rationality of Semantic Change and Variation. [Preprint]

Brigandt, Ingo (2003) The Role a Concept Plays in Science - The Case of Homology. [Preprint]

Brigandt, Ingo (2004) The Role a Concept Plays in Science - The Case of Homology. [Preprint]

Brigandt, Ingo (2001) The 'Role' a Concept Plays in Science - The Case of Homology. [Preprint]

Brigandt, Ingo (2004) An alternative to Kitcher's theory of conceptual progress and his account of the change of the gene concept. [Preprint]

Brigandt, Ingo (2017) Explanation of Molecular Processes Without Tracking Mechanism Operation. [Preprint]

Browning, Heather (2020) Assessing Measures of Animal Welfare. [Preprint]

Burian, Richard (2008) Selection Does Not Operate Primarily on Genes. [Preprint]

Burnston, Daniel C. (2019) Getting over Atomism: Functional Decomposition in Complex Neural Systems. [Preprint]

Byron (formerly Baker), Jason M. (2006) Whence philosophy of biology? [Preprint]

Calcott, Brett and Griffiths, Paul E. and Pocheville, Arnaud (2017) Signals that make a Difference. [Preprint]

Chiu, Lynn and Gilbert, Scott (2019) Niche construction and the transition to herbivory: Phenotype switching and the organization of new nutritional modes. [Preprint]

ChoGlueck, Christopher (2019) Broadening the Scope of Our Understanding of Mechanisms: Lessons from the History of the Morning-After Pill. [Preprint]

Cofnas, Nathan (2017) Innateness as genetic adaptation: Lorenz redivivus (and revised). [Preprint]

Colombo, Matteo and Wright, Cory (2017) First principles in the life sciences: The free-energy principle, organicism, and mechanism. [Preprint]

Currie, Adrian (2017) The Argument from Surprise. [Preprint]

Currie, Adrian (2013) Convergence as Evidence. [Preprint]

Currie, Adrian (2016) Ethnographic Analogy, the Comparative Method, and Archaeological Special Pleading. [Preprint]

Currie, Adrian (2017) Hot-Blooded Gluttons: Dependency, Coherence & Method in the Historical Sciences. [Preprint]

Currie, Adrian (2015) Marsupial Lions & Methodological Omnivory: Function, Success and Reconstruction in Paleobiology. [Preprint]

Currie, Adrian (2018) Mass Extinctions as Major Transitions. [Preprint]

Currie, Adrian (2016) The Mystery of the Triceratops's Mother: How to be a realist about the species category. [Preprint]

Currie, Adrian (2019) Paleobiology and Philosophy. [Preprint]

Currie, Adrian (2019) Simplicity, One-Shot Hypotheses & Paleobiological Explanation. [Preprint]

Currie, Adrian (2014) Venomous Dinosaurs and Rear-Fanged Snakes: Homology and Homoplasy Characterized. [Preprint]

Currie, Adrian and Sterelny, Kim (2017) In defence of story-telling. [Preprint]

Currie, Adrian and Turner, Derek (2016) Scientific Knowledge of the Deep Past. [Preprint]

Currie, Adrian and Walsh, Kirsten (2018) Newton on Islandworld: ontic-driven explanations of scientific method. [Preprint]

Dietrich, Michael R. and Ankeny, Rachel and Crowe, Nathan and Green, Sara and Leonelli, Sabina (2019) How to Choose Your Research Organism. [Preprint]

Donhauser, Justin and Worley, Sara and Bradie, Michael and Bouzat, Juan (2019) The Problem of Mooted Models for Analyses of Microbiome Causality. [Preprint]

Elliott, Tyler A. and Linquist, Stefan and Gregory, T. Ryan (2014) Conceptual and empirical challenges of ascribing functions to transposable elements. [Preprint]

Elliott-Graves, Alkistis (2018) Generality and Causal Interdependence in Ecology. [Preprint]

Francken, Jolien C. and Slors, Marc and Craver, Carl F. (2020) Cognitive Ontology and the Search for Neural Mechanisms: Three Foundational Problems. [Preprint]

French, Steven (2009) Shifting to Structures in Physics and Biology: A Prophylactic for Promiscuous Realism. [Preprint]

Ganson, Todd (2020) A role for representations in inflexible behavior. [Preprint]

Garson, Justin (2017) Against Organizational Functions. [Preprint]

Gilead, Amihud (2014) Singularity and Uniqueness: Why Is Our Immune System Subject to Psychological and Cognitive Traits? [Preprint]

Gomez-Marin, Alex (2019) Computational neuroscience needs theoretical ethology: correcting an anthropomorphic bias. [Preprint]

Gomez-Marin, Alex (2018) Evolution and what the intellect makes of it. [Preprint]

Green, Sara (2014) A philosophical evaluation of adaptationism as a heuristic strategy. [Preprint]

Green, Sara (2020) Cancer beyond genetics: On the practical implications of downward causation. [Preprint]

Green, Sara (2017) Scale-dependency and Downward Causation in Biology. [Preprint]

Green, Sara and Andersen, Hanne (2019) Systems Science and the Art of Interdisciplinary Integration. [Preprint]

Green, Sara and Dietrich, Michael R. and Leonelli, Sabina and Ankeny, Rachel (2018) ‘Extreme’ Organisms and the Problem of Generalization: Interpreting the Krogh Principle. [Preprint]

Griffiths, Paul (2005) Function, Homology and Character Individuation. [Preprint]

Griffiths, Paul and Tabery, James (2008) Behavioral Genetics and Development: Historical and Conceptual Causes of Controversy. [Preprint]

Griffiths, Paul E (2006) Function, Homology and Character Individuation. [Preprint]

Griffiths, Paul E. (2004) Instinct in the ‘50s: The British Reception of Konrad Lorenz’s Theory of Instinctive Behavior. [Preprint]

Griffiths, Paul Edmund (2005) Function, Homology and Character Individuation. [Preprint]

Griffiths, Paul Edmund (2008) In what sense does 'nothing make sense except in the light of evolution'? [Preprint]

Guala, Francesco (2010) Reciprocity: weak or strong? What punishment experiments do (and do not) demonstrate. [Preprint]

Heesen, Remco (2015) The Young-(Helmholtz)-Maxwell Theory of Color Vision. [Preprint]

Helgeson, Casey (2012) Why you have one trait rather than another: The failure of the explanatory-chain stragegy. [Preprint]

Illari, Phyllis and Russo, Federica (2016) Information channels and biomarkers of disease. [Preprint]

Ivani, Silvia and Sprenger, Jan (2016) Challenging the Dichotomy of Cognitive and Non-Cognitive Values: Feminist Values and Evolutionary Psychology. [Preprint]

Jantzen, Benjamin and Danks, David (2008) Biological Codes and Topological Causation. [Preprint]

Jantzen, Benjamin C. (2018) Symmetry and Causation: A General Theory of Biological Individuality. [Preprint]

Jeler, Ciprian (2017) Multi-level selection and the issue of environmental homogeneity. [Preprint]

Jones, Elizabeth (2019) Ancient Genetics to Ancient Genomics: Celebrity and Credibility in Data-Driven Practice. [Preprint]

Kaiser, Marie I. and Müller, Caroline (2020) What Is an Animal Personality? [Preprint]

Karola, Stotz and Griffiths, Paul E. (2007) Biohumanities: Rethinking the relationship between biosciences, philosophy and history of science, and society. [Preprint]

Kasirzadeh, Atoosa (2020) A new role for mathematics in empirical sciences. [Preprint]

Killin, Anton and Currie, Adrian (2016) Musical pluralism and the science of music. [Preprint]

Kirchhoff, Michael and van Es, Thomas (2021) A Universal Ethology Challenge to the Free Energy Principle: Species of Inference and Good Regulators. [Preprint]

Korenić, Andrej and Perović, Slobodan and Ćirković, Milan and Miquel, Paul-Antoine (2019) Symmetry breaking and functional incompleteness in biological systems. [Preprint]

Kostic, Daniel (2019) Unifying the debates: mathematical and non-causal explanations. [Preprint]

Kostic, Daniel and Hilgetag, Claus and Tittgemeyer, Marc (2020) Unifying the essential concepts of biological networks: biological insights and philosophical foundations. [Preprint]

Kostyrka, Gladys (2015) Disease ecology and the concept of emerging infectious disease: its impact on the epidemiology of rabies virus, 1990s-2010s. [Preprint]

Kostyrka, Gladys (2015) Interspecies transmission and viral epidemics: integration of molecular and ecological approaches in the epidemiology of two RNA viruses (1989-2010s). [Preprint]

Kuhlmann, Meinard (2011) Mechanisms in Dynamically Complex Systems. [Preprint]

Laplane, Lucie (2018) Cancer stem cells modulate patterns and processes of evolution in cancers. [Preprint]

Leonelli, Sabina (2018) What Distinguishes Data from Models? [Preprint]

Leonelli, Sabina and Tempini, Niccolo (2018) Where Health and Environment Meet: The Use of Invariant Parameters for Big Data Analysis. [Preprint]

Levy, Arnon and Currie, Adrian (2015) Model Organisms are not (Theoretical) Models. [Preprint]

Lewis, Cory (2018) The Domain Relativity of Evolutionary Contingency. [Preprint]

Linquist, Stefan (2016) Which evolutionary model best explains the culture of honour? [Preprint]

Linquist, Stefan and Cottenie, Karl and Elliott, Tyler and Saylor, Brent and Kremer, Stefan and Gregory, T. Ryan (2015) Applying ecological models to communities of genetic elements: the case of neutral theory. [Preprint]

Linquist, Stefan and Saylor, Brent and Cottenie, Karl and Elliott, Tyler A. and Kremer, Stefan C. and Gregory, T. Ryan (2013) Distinguishing ecological from evolutionary approaches to transposable elements. [Preprint]

Liu, Ying (2018) Design Explanation in Systems Biology and Design Principles. [Preprint]

Livengood, Jonathan and Edwards, Adam (2019) Calibrating Chromatography: How Tswett Broke the Experimenters' Regress. [Preprint]

Lohse, Simon and Wasmer, Martin S. and Reydon, Thomas A. C. (2020) Integrating Philosophy of Science Into Research on Ethical, Legal and Social Issues in the Life Sciences. [Preprint]

Longy, Françoise (2007) Artifacts and Organisms: A Case for a New Etiological Theory of Functions. [Preprint]

Lu, Qiaoying and Bourrat, Pierrick (2017) The Evolutionary Gene and the Extended Evolutionary Synthesis. [Preprint]

Ludwig, David (2017) "Letting go of 'Natural Kind'. Towards a Multidimensional Framework of Non-Arbitrary Classification" Philosophy of Science. [Preprint]

Ludwig, David and El-Hani, Charbel (2019) Philosophy of Ethnobiology: Understanding Knowledge Integration and Its Limitations. [Preprint]

Machery, Edouard (2014) Experimental Philosophy of science. [Preprint]

Malaterre, Christophe (2009) Are self-organizing biochemical networks emergent? [Preprint]

Malaterre, Christophe (2009) Can synthetic biology shed light on the origin of life? [Preprint]

Malaterre, Christophe (2010) Lifeness signatures and the roots of the tree of life. [Preprint]

Malaterre, Christophe (2010) On what it is to fly can tell us something about what it is to live. [Preprint]

Malaterre, Christophe (2007) Organicism and Reductionism in Cancer Research: Towards a Systemic Approach. [Preprint]

Martínez, Manolo (2019) Deception as Cooperation. [Preprint]

Martínez, Manolo (2019) Usefulness Drives Representations to Truth -- A Family of Counterexamples to Hoffman’s Interface Theory of Perception. [Preprint]

Matthews, Lucas J. (2017) On mechanistic reasoning in unexpected places: the case of population genetics. [Preprint]

McConwell, Alison and Currie, Adrian (2017) Gouldian Arguments & the Sources of Contingency. [Preprint]

McConwell, Alison K (2019) Contingency's Causality and Structural Diversity. [Preprint]

Meincke, Anne Sophie (2018) Autopoiesis, Biological Autonomy and the Process View of Life. [Preprint]

Meincke, Anne Sophie (2018) The Disappearance of Change: Towards a Process Account of Persistence. [Preprint]

Meynell, Letitia and Lopez, Andrew (2020) Gendering Animals. [Preprint]

Millstein, Roberta L. (2007) Concepts of Drift and Selection in “The Great Snail Debate” of the 1950s and Early 1960s. [Preprint]

Millstein, Roberta L. (2007) Distinguishing Drift and Selection Empirically: “The Great Snail Debate” of the 1950s. [Preprint]

Millstein, Roberta L. (2013) Environmental Ethics. [Preprint]

Millstein, Roberta L. (2012) Exploring the Status of Population Genetics: The Role of Ecology. [Preprint]

Millstein, Roberta L. (2008) Hsp90-Induced Evolution: Adaptationist, Neutralist, and Developmentalist Scenarios. [Preprint]

Millstein, Roberta L. (2013) Natural Selection and Causal Productivity. [Preprint]

Millstein, Roberta L. (2006) Natural Selection as a Population-Level Causal Process. [Preprint]

Millstein, Roberta L. (2014) Probability in Biology: The Case of Fitness. [Preprint]

Millstein, Roberta L. and Skipper, Robert A. (2006) Population Genetics. [Preprint]

Millstein, Roberta L. (2017) Debunking Myths About Aldo Leopold’s Land Ethic. [Preprint]

Millstein, Roberta L. (2019) Functions and Functioning in Aldo Leopold’s Land Ethic and in Ecology. [Preprint]

Millstein, Roberta L. (2016) Is Aldo Leopold's ‘Land Community’ an Individual? [Preprint]

Millstein, Roberta L. (2019) Types of Experiments and Causal Process Tracing: What Happened on the Kaibab Plateau in the 1920s. [Preprint]

Monton, Bradley (2007) Design Inferences in an Infinite Universe. [Preprint]

Morris, Rick (2018) Stranger in a strange land: an optimal-environments account of evolutionary mismatch. [Preprint]

Mossé, Brigitte and Remy, Élisabeth (2019) A combinatorial exploration of boolean dynamics generated by isolated and chorded circuits. [Preprint]

Munoz, François and huneman, philippe (2016) From the neutral theory to a comprehensive and multiscale theory of ecological equivalence. [Preprint]

Novick, Aaron and Scholl, Raphael (2017) Presume It Not: True Causes in the Search for the Basis of Heredity. [Preprint]

O'Connor, Cailin (2015) Evolving to Generalize: Trading Precision for Speed. [Preprint]

O'Connor, Cailin (2020) Samir Okasha's Agents and Goals in Evolution, a Review. [Preprint]

Otsuka, Jun (2018) Ontology, Causality, and Methodology of Evolutionary Research Programs. [Preprint]

Pence, Charles H. and Ramsey, Grant (2018) How to do digital philosophy of science. [Preprint]

Perović, Slobodan (2019) The Complexity-based Explanatory Strategy, Biological Levels, and the Origin of Life. [Preprint]

Plutynski, Anya and Bertolaso, Marta (2018) What and How do Cancer Systems Biologists Explain? [Preprint]

Poliseli, Luana (2020) The emergence of scientific understanding in current ecological research practice. [Preprint]

Porter, Brian (2019) Teleosemantics and Tetrachromacy. [Preprint]

Powell, Alexander (2011) Biological mechanisms: a case study in conceptual plasticity. [Preprint]

Pradeu, Thomas (2009) The Organism in Developmental System Theory (DST). [Preprint]

Pradeu, Thomas (2010) What is an organism? An immunological answer. [Preprint]

Ramsey, Grant (2015) Can altruism be unified? [Preprint]

Ramsey, Grant and De Block, Andreas (2015) Is cultural fitness hopelessly confused? [Preprint]

Ramsey, Grant (2017) Trait bin and trait cluster accounts of human nature. [Preprint]

Ramsey, Grant (2017) What Is human nature for? [Preprint]

Ramsey, Grant (2017) What is animal culture? [Preprint]

Ramstead, Maxwell J. D. and Kirchhoff, Michael D. and Friston, Karl J. (2019) A tale of two densities: Active inference is enactive inference. [Preprint]

Ratti, Emanuele (2019) Phronesis and Automated Science: The Case of Machine Learning and Biology. [Preprint]

Reutlinger, Alexander and Saatsi, Juha (2017) Introduction: Scientific Explanation Beyond Causation. [Preprint]

Roffé, Ariel Jonathan (2020) Dynamic Homology and Circularity in Cladistic Analysis. [Preprint]

Roffé, Ariel Jonathan and Ginnobili, Santiago (2019) Optimality Models and the Propensity Interpretation of Fitness. [Preprint]

Ross, Lauren N. (2015) Causal Control: A Rationale for Causal Selection. [Preprint]

Ross, Lauren N. and Woodward, James (2016) Koch’s Postulates: An Interventionist Perspective. [Preprint]

Ross, Lauren N. (2018) Causal concepts in biology: How pathways differ from mechanisms and why it matters. [Preprint]

Ross, Lauren N. (2017) Causal selection and the pathway concept. [Preprint]

Ross, Lauren N. (2018) The Doctrine of Specific Etiology. [Preprint]

Ruse, Michael (2008) The Biological Sciences Can Act as a Ground for Ethics. [Preprint]

Sapienza, Carmen (2008) Selection Does Operate Primarily on Genes: In Defense of the Gene as the Unit of Selection. [Preprint]

Sarkar, Sahotra (2001) Defining 'Biodiversity'; Assessing Biodiversity. [Preprint]

Schindler, Samuel (2013) Mechanistic explanation: asymmetry lost. [Preprint]

Schlaepfer, Guillaume and Weber, Marcel (2018) Thought Experiments in Biology. [Preprint]

Schliesser, Eric (2019) Synthetic Philosophy. [Preprint]

Scholl, Raphael (2019) Unwarranted Assumptions: Claude Bernard and the growth of the vera causa standard. [Preprint]

Serban, Maria and Green, Sara (2019) Biological robustness: design, organization, and mechanisms. [Preprint]

Shan, Yafeng (2018) Kuhn's "Wrong Turning" and Legacy Today. [Preprint]

Sharlow, Mark (2007) Phonetic Possibility and Modal Logic. [Preprint]

Sheredos, Benjamin and Bechtel, William (2016) Imagining Mechanisms with Diagrams. [Preprint]

Skillings, Derek (2016) Holobionts and the ecology of organisms - Multi-species communities or integrated individuals? [Preprint]

Skipper, Robert (2002) The Persistence of the R.A. Fisher-Sewall Wright Controversy. [Preprint]

Skipper, Robert and Millstein, Roberta (2004) Thinking About Evolutionary Mechanisms: Natural Selection. [Preprint]

Slater, Matthew (2013) Natural Kindness. [Preprint]

Sterner, Beckett and Witteveen, Joeri and Franz, Nico (2019) Alternatives to Realist Consensus in Bio-Ontologies: Taxonomic Classification as a Basis for Data Discovery and Integration. [Preprint]

Stotz, Karola and Griffiths, Paul E. (2007) Biohumanities: Rethinking the relationship between biosciences, philosophy and history of science, and society. [Preprint]

Stotz, Karola and Griffiths, Paul E. (2017) Biological Information, causality and specificity – an intimate relationship. [Preprint]

Suárez, Mauricio (2019) The Complex Nexus of Evolutionary Fitness. [Preprint]

Tabery, James (2007) Biometric and Developmental Gene-Environment Interaction: Looking Back, Moving Forward. [Preprint]

Tabery, James (2006) Looking Back on Lancelot's Laughter: The Lancelot Thomas Hogben Papers. [Preprint]

Tabery, James (2008) R.A. Fisher, Lancelot Hogben, and the Origin(s) of Genotype-Environment Interaction. [Preprint]

Taylor, Henry (2019) Whales, fish and Alaskan bears: interest-relative taxonomy and kind pluralism in biology. [Preprint]

Triviño, Vanessa and Suárez, Javier (2020) Holobionts: Ecological communities, hybrids, or biological individuals? A metaphysical perspective on multispecies systems. [Preprint]

Tsou, Jonathan Y. (2020) Social Construction, HPC kinds, and the Projectability of Human Categories. [Preprint]

Veit, Walter (2020) Biological Normativity: A New Hope for Naturalism? [Preprint]

Veit, Walter (2019) Model Pluralism. [Preprint]

Veit, Walter and Browning, Heather (2020) Phenomenology Applied to Animal Health and Suffering. [Preprint]

Veit, Walter and Browning, Heather (2020) Two Kinds of Conceptual Engineering. [Preprint]

Velasco, Joel (2008) Species concepts should not conflict with evolutionary history, but often do. [Preprint]

Waters, C. Kenneth (2007) Causes that Make a Difference. [Preprint]

Waters, C. Kenneth (2007) The Nature and Context of Exploratory Experimentation: An Introduction to Three Case Studies of Exploratory Research. [Preprint]

Waters, C. Kenneth (2016) No General Structure. [Preprint]

Waters, C. Kenneth (2018) Ask Not "What is an Individual?". [Preprint]

Weber, Marcel (2005) Indeterminism in Neurobiology. [Preprint]

Weisberg, Michael and Reisman, Kenneth (2008) The Robust Volterra Principle. [Preprint]

Werndl, Charlotte (2012) Do Microbes Question Standard Thinking in the Philosophy of Biology? Critical Notice of John Dupré "Processes of Life – Essays in the Philosophy of Biology". [Preprint]

Werndl, Charlotte (2011) Probability, Indeterminism and Biological Processes. [Preprint]

Wilkins, John S. (2007) The Concept and Causes of Microbial Species. [Preprint]

Wilkins, John S. and Nelson, Gareth J. (2008) Trémaux on species: A theory of allopatric speciation (and punctuated equilibrium) before Wagner. [Preprint]

Winsberg, Eric (2019) Putting races on the ontological map: a close look at Spencer’s ‘new biologism’ of race. [Preprint]

Witteveen, Joeri (2014) Naming and contingency: the type method of biological taxonomy. [Preprint]

Witteveen, Joeri (2019) Regression explanation and statistical autonomy. [Preprint]

Wolfe, Charles T. (2010) Do organisms have an ontological status? [Preprint]

Woodward, James (2009) Causation in Biology: Stability, Specificity, and the Choice of Levels of Explanation. [Preprint]

Yeh, Hsiao-Fan and Chen, Ruey-Lin (2018) Intervention as both Test and Exploration: Reexamining the PaJaMo Experiment based on Aims and Modes of Interventions. [Preprint]

huneman, philippe (2006) Evolutionary theory in philosophical focus. [Preprint]

van Dijk, Peter J. (2020) Gregor Mendel’s meeting with Pope Pius IX: the truth in the story. [Preprint]

van Es, Thomas and Kirchhoff, Michael D. (2020) Between pebbles and organisms: Weaving autonomy into the Markov blanket. [Preprint]

Conference or Workshop Item

Abrams, Marshall (2014) Coherence, Muller’s Ratchet, and the Maintenance of Culture. In: UNSPECIFIED.

Abrams, Marshall (2006) How Do Natural Selection and Random Drift Interact? In: UNSPECIFIED.

Andersen, Holly (2012) When to expect violations of causal faithfulness and why it matters. In: UNSPECIFIED.

Beisbart, Claus (2009) Kant’s Characterization of Natural Ends. In: UNSPECIFIED.

Bogen, Jim (2006) The Hodgkin-Huxley Equations and the Concrete Model; Comments on Craver, Schaffner, and Weber. In: UNSPECIFIED.

Brigandt, Ingo (2015) Social Values Influence the Adequacy Conditions of Scientific Theories: Beyond Inductive Risk. In: UNSPECIFIED.

Brigandt, Ingo (2007) Typology now: Homology and developmental constraints explain evolvability. In: UNSPECIFIED.

Burnston, Daniel (2016) Real Patterns in Biological Explanation. In: UNSPECIFIED.

Bzovy, Justin (2016) Aristotelian Species Pluralism. In: UNSPECIFIED.

Casini, Lorenzo (2014) How to Model Mechanistic Hierarchies. In: UNSPECIFIED.

Casini, Lorenzo (2015) How to Model Mechanistic Hierarchies. In: UNSPECIFIED.

Charbonneau, Mathieu (2014) Populations without Reproduction. In: UNSPECIFIED.

Chen, Ruey-Lin (2018) Individuating Genes as Types or Individuals: Philosophical Implications on Individuality, Kinds, and Gene Concepts. In: UNSPECIFIED.

Currie, Adrian (2012) Narratives & Mechanisms. In: UNSPECIFIED.

Ereshefsky, Marc (2007) Psychological Categories as Homologies: Lessons from Ethology. In: UNSPECIFIED.

Eronen, Markus (2016) Robust Realism for the Life Sciences. In: UNSPECIFIED.

Fazekas, Peter and Kertesz, Gergely (2018) Are higher mechanistic levels causally autonomous? In: UNSPECIFIED.

Fenton-Glynn, Luke (2014) Ceteris Paribus Laws and Minutis Rectis Laws. In: UNSPECIFIED.

Garson, Justin (2020) Edmond Goblot’s (1858-1935) Selected Effects Theory of Function: A Reappraisal. In: UNSPECIFIED.

Gildenhuys, Peter (2014) Probability in Classical Population Genetics. In: UNSPECIFIED.

Griffiths, Paul Edmund (2007) The Phenomena of Homology. In: UNSPECIFIED.

Haber, Matthew H. (2012) Multilevel Lineages and Multidimensional Trees: The Levels of Lineage and Phylogeny Reconstruction. In: UNSPECIFIED.

Hamilton, Andrew and Haber, Matt (2004) Coherence, Consistency, and Cohesion: Clade Selection in Okasha and Beyond. In: UNSPECIFIED. (In Press)

Hitchen, S.A. (2014) Adapting our Language: The Problem (?) of Teleological Language in the Philosophy of Biology. In: UNSPECIFIED.

Jackson, John (2008) Definitional Argument in Evolutionary Psychology and Cultural Anthropology. In: UNSPECIFIED.

Jamniczky, Heather (2004) Biological Pluralism and Homology. In: UNSPECIFIED. (Unpublished)

Kaiser, Marie I. (2014) On the Limits of Causal Modeling: Spatially-Structurally Complex Phenomena. In: UNSPECIFIED.

Kendig, Catherine (2010) An ontogenetic-ecological conception of species: a new approach to an old idea. In: UNSPECIFIED.

Keyser, Vadim (2016) Effects and Artifacts: Robustness Analysis and the Production Process. In: UNSPECIFIED.

Koskinen, Rami (2016) Synthetic Biology and the Search for Alternative Genetic Systems: Taking How-Possibly Models Seriously. In: UNSPECIFIED.

Kronfeldner, Maria E. (2008) "If there is nothing beyond the organic ...": Heredity and Culture at the Boundaries of Anthropology in the Work of Alfred L. Kroeber. In: UNSPECIFIED.

Kunz, Werner and Werning, Markus (2009) The Biological Species as a Gene-Flow Community. Species Essentialism Does Not Imply Species Universalism. In: UNSPECIFIED.

Kurth, Charlie (2018) Are Emotions Psychological Constructions? In: UNSPECIFIED.

Linquist, Stefan (2015) Against Lawton’s contingency thesis, or, why the reported demise of community ecology is greatly exaggerated. In: UNSPECIFIED.

Love, Alan (2007) Functional Homology and Homology of Function: Biological Concepts and Philosophical Consequences. In: UNSPECIFIED.

Matthen, Mohan (2007) Defining Vision: What Homology Thinking Contributes. In: UNSPECIFIED.

Millstein, Roberta L. (2014) How the Concept of 'Population' Resolves Concepts of 'Environment'. In: UNSPECIFIED.

Millstein, Roberta L. (2015) Is Aldo Leopold's 'Land Community' an Individual? In: UNSPECIFIED.

Millstein, Roberta L. (2014) Types of Experiments and Causal Process Tracing: What Happened on the Kaibab Plateau in the 1920s? In: UNSPECIFIED.

Millstein, Roberta L. (2017) Understanding Leopold’s Concept of ‘Interdependence’ for Environmental Ethics and Conservation Biology. In: UNSPECIFIED.

Nanay, Bence (2004) Can Cumulative Selection Explain Adaptation? In: UNSPECIFIED. (In Press)

Northcott, Robert (2008) Innateness and Science. In: UNSPECIFIED.

Northcott, Robert and Alexandrova, Anna (2014) Armchair Science. In: UNSPECIFIED.

O'Malley, Maureen A. and Brigandt, Ingo and Love, Alan C. and Crawford, John W. and Gilbert, Jack A. and Knight, Rob and Mitchell, Sandra D. and Rohwer, Forest (2014) Multilevel Research Strategies and Biological Systems. In: UNSPECIFIED.

Odenbaugh, Jay (2015) Human Nature, Anthropology, and the Problem of Variation. In: UNSPECIFIED.

Oftedal, Gry (2004) Heritability and Genetic Causation. In: UNSPECIFIED. (Unpublished)

Schaffner, Kenneth (2006) Theories, Models, and Equations in Biology: The Heuristic Search for Emergent Simplifications in Neurobiology. In: UNSPECIFIED.

Schmaus, Warren (2004) Evolutionary and Neuroscience Approaches to the Study of Cognition. In: UNSPECIFIED. (Unpublished)

Sharma, Kriti (2015) After Interaction: Why Interdependence is Hard to Think About and How to Do it Anyway. In: UNSPECIFIED.

Shavit, Ayelet and Kolumbus, Anat and Ellison, Aaron M. (2016) Two Roads Diverge in a Wood: Indifference to the Difference Between ‘Diversity’ and ‘Heterogeneity’ Should Be Resisted on Epistemic and Moral Grounds. In: UNSPECIFIED.

Shenker, Orly R. (2016) A reductive physicalist account of the autonomy of psychology. In: UNSPECIFIED.

Sheredos, Benjamin and Burnston, Daniel and Abrahamsen, Adele and Bechtel, William (2012) Why do biologists use so many diagrams? In: UNSPECIFIED.

Sheredos, Benjamin and Bechtel, William (2016) Constructing diagrams to understand phenomena and mechanisms. In: UNSPECIFIED.

Silberstein, Michael and Chemero, Tony (2012) Constraints on Localization and Decomposition as Explanatory Strategies in the Biological Sciences. In: UNSPECIFIED.

Swaim, Daniel G. (2018) The Roles of Possibility and Mechanism in Narrative Explanation. In: UNSPECIFIED.

Tabery, James (2008) Difference Mechanisms. In: UNSPECIFIED.

Verpooten, Jan (2008) Why did art behavior evolve? A cultural sensory exploitation hypothesis. In: UNSPECIFIED.

Vieland, Veronica J (2016) Measurement of Statistical Evidence: Picking Up Where Hacking (et al.) Left Off. In: UNSPECIFIED.

Weber, Marcel (2008) Behavioral Traits, the Intentional Stance, and Biological Functions. In: UNSPECIFIED.

Weber, Marcel (2006) Causes without Mechanisms: Experimental Regularities, Physical Laws, and Neuroscientific Explanation. In: UNSPECIFIED.

Weber, Marcel (2004) Indeterminism in Neurobiology: Some Good and Some Bad News. In: UNSPECIFIED. (Unpublished)

Weber, Marcel (2018) Causal Specificity, Biological Possibility and Non-parity about Genetic Causes. In: UNSPECIFIED.

Weber, Marcel (2014) On the Incompatibility of Dynamical Biological Mechanisms and Causal Graph Theory. In: UNSPECIFIED.

Wiegman, Isaac (2014) Evidential Criteria of Homology for Comparative Pscyhology. In: UNSPECIFIED.

Wolfe, Charles T. (2010) Why was there no controversy over Life in the Scientific Revolution? In: UNSPECIFIED.

Published Article or Volume

Aaby, Bendik and Ramsey, Grant (2019) Three Kinds of Niche Construction. The British Journal for the Philosophy of Science. ISSN 1464-3537

Andersen, Holly (2011) Mechanisms, Laws, and Regularities. Philosophy of Science, 78 (2). pp. 325-331.

Barwich, Ann-Sophie (2019) The Value of Failure in Science: The Story of Grandmother Cells in Neuroscience. Frontiers in Neuroscience.

Bauer, Mark (2015) Normative Characterization in Biological and Cognitive Explanations. THEORIA. An International Journal for Theory, History and Foundations of Science, 30 (2). pp. 271-286. ISSN 2171-679X

Bechtel, William (2016) Mechanists must be holists too: Perspectives from Circadian Biology. Journal of the History of Biology.

Bich, Leonardo (2012) Complex emergence and the living organization: an epistemological framework for biology. Synthese, 185 (2). pp. 215-232. ISSN 1573-0964

Bich, Leonardo and Moreno, Alvaro (2015) The role of regulation in the origin and synthetic modelling of minimal cognition. BioSystems.

Bich, Leonardo and Mossio, Matteo and Ruiz-Mirazo, Kepa and Moreno, Alvaro (2015) Biological regulation: controlling the system from within. Biology & Philosophy.

Bich, Leonardo (2020) Interactive Models in Synthetic Biology: Exploring Biological and Cognitive Inter-Identities. Frontiers in Psychology, 11 (682). ISSN 1664-1078

Bich, Leonardo (2018) Robustness and autonomy in biological systems: how regulatory mechanisms enable functional integration, complexity and minimal cognition through the action of second-order control constraints. Biological Robustness. Emerging Perspectives from within the Life Sciences. pp. 123-147.

Bich, Leonardo (2019) The problem of functional boundaries in prebiotic and inter-biological systems. Minati, G., Pessa E. and Abram, M. (eds) Systemics of Incompleteness and Quasi-Systems. pp. 295-302.

Bich, Leonardo and Frick, Ramiro (2018) Synthetic Modelling of Biological Communication: A Theoretical and Operational Framework for the Investigation of Minimal Life and Cognition. Complex Systems, 27 (3). pp. 267-287. ISSN 0891-2513

Bich, Leonardo and Green, Sara (2016) Is defining life pointless? Operational definitions at the frontiers of Biology. Synthese. ISSN 1573-0964

Bich, Leonardo and Mossio, Matteo and Soto, Ana (2020) Glycemia Regulation: From Feedback Loops to Organizational Closure. Frontiers in Physiology, 11 (69). ISSN 1664-042X

Bich, Leonardo and Pradeu, Thomas and Moreau, Jean-Francois (2019) Understanding Multicellularity: The Functional Organization of the Intercellular Space. Frontiers in Physiology, 10 (11170). ISSN 1664-042X

Cabrera, Frank (2017) Cladistic Parsimony, Historical Linguistics and Cultural Phylogenetics. Mind and Language, 32 (1). pp. 65-100.

Calcott, Brett (2020) A Roomful of Robovacs: How to Think About Genetic Programs. Philosophical Perspectives on the Engineering Approach in Biology: Living Machines?.

Cáceres Vázquez, Emilio and Saborido, Cristian (2017) Intervals of Quasi-Decompositionality and Emergent Properties. THEORIA. An International Journal for Theory, History and Foundations of Science, 32 (1). pp. 89-108. ISSN 2171-679X

Dagg, Joachim (2016) On Recognising the Paradox of Sex. Philosophy and Theory in Biology, 8. ISSN 1949-0739

Deem, Michael and Ramsey, Grant (2016) Guilt by association? Philosophical Psychology.

Desjardins, Eric and Donhauser, Justin and Barker, Gillian (2018) Ecological Historicity, Functional Goals, and Novelty in the Anthropocene. Environmental Values.

Donhauser, Justin (2017) Invisible disagreement: an inverted qualia argument for realism. Philosophical Studies, 174 (3). pp. 593-606.

Donhauser, Justin (2016) Making Ecological Values Make Sense: Toward More Operationalizable Ecological Legislation. Ethics and the Environment, 21 (2). pp. 1-25.

Doolittle, W. Ford (2018) Speciation without Species: A Final Word. Philosophy, Theory, and Practice in Biology, 11 (014). ISSN 2475-3025

Dorato, Mauro (2012) Mathematical biology and the existence of biological laws. Probabilities, Laws and Structure. pp. 109-121.

Elliott, Steve (2019) Proof of Concept Research. Philosophy of Science. ISSN 0031-8248

Elliott, Steve (2019) Research Problems. The British Journal for the Philosophy of Science. ISSN 0007-0882

Eronen, Markus (2017) Robust Realism for the LIfe Sciences. Synthese. ISSN 1573-0964

Escribano Cabeza, Miguel (2019) Jan Swammerdam and the limits of preformationism. THEORIA. An International Journal for Theory, History and Foundations of Science, 34 (3). pp. 423-439. ISSN 2171-679X

Fagan, Melinda B. (2015) Crucial Stem Cell Experiments? Stem Cells, Uncertainty, and Single-Cell Experiments. THEORIA. An International Journal for Theory, History and Foundations of Science, 30 (2). pp. 183-205. ISSN 2171-679X

Ferner, Adam and Pradeu, Thomas (2017) Ontologies of Living Beings. Philosophy, Theory, and Practice in Biology, 9 (4).

Frick, Ramiro and Bich, Leonardo and Moreno, Alvaro (2019) An organisational approach to biological communication. Acta Biotheoretica. ISSN 0001-5342

Gelfert, Axel (2018) Models in Search of Targets: Exploratory Modelling and the Case of Turing Patterns. Philosophy of Science: Between the Natural Sciences, the Social Sciences, and the Humanities. pp. 245-269.

Greslehner, Gregor P. (2018) The "unreasonable effectiveness of mathematics" in biology and the fallacy from complexity. Gabriele M. Mras, Paul Weingartner & Bernhard Ritter (eds.) Contributions of the Austrian Ludwig Wittgenstein Society Volume XXVI. Philosophy of Logic and Mathematics. Contributions of the 41st International Wittgenstein Symposium. pp. 70-72.

Greslehner, Gregor P. and Lemoine, Maël (2020) A dual decomposition strategy of both microbial and phenotypic components for a better understanding of causal claims.

Guay, Alexandre and Pradeu, Thomas (2015) To Be Continued: The Genidentity of Physical and Biological Processes. Individuals Across the Sciences. pp. 317-347.

Haber, Matthew H. (2019) Species in the Age of Discordance. Philosophy, Theory, and Practice in Biology, 11 (021). ISSN 2475-3025

Hahn, Andre M. (2016) Can a History of Photosynthesis be Grand? Philosophy and Theory in Biology, 8. ISSN 1949-0739

Hey, Spencer Phillips (2015) Judging Quality and Coordination in Biomarker Diagnostic Development. THEORIA. An International Journal for Theory, History and Foundations of Science, 30 (2). pp. 207-227. ISSN 2171-679X

Hochstein, Eric (2017) Why One Model is Never Enough: A Defense of Explanatory Holism. Biology & Philosophy, 32. pp. 1105-1125. ISSN 1572-8404

Holt, Louisa Jane and Holm, Sune (2017) Alvaro Moreno and Matteo Mossio. 2015. Biological autonomy: a philosophical and theoretical enquiry. THEORIA. An International Journal for Theory, History and Foundations of Science, 32 (3). pp. 392-395. ISSN 2171-679X

Ioannidis, Stavros and Psillos, Stathis (2017) In Defense of Methodological Mechanism: The Case of Apoptosis. Axiomathes. ISSN 1572-8390

Jeler, Ciprian (2020) A note against the use of “belonging to” properties in multilevel selection theory. Acta Biotheoretica. ISSN 0001-5342

Kistler, Max (2016) Espèces naturelles, profil causal et constitution multiple. Lato Sensu, revue de la Société de philosophie des sciences, 3 (1). pp. 17-30. ISSN 2295-8029

Laimann, Jessica (2017) Capricious kinds. The British Journal for the Philosophy of Science.

Laplane, Lucie and Duluc, Dorothée and Bikfalvi, Andreas and Larmonier, Nicolas and Pradeu, Thomas (2019) Beyond the tumour microenvironment. International Journal of Cancer, 145 (10). pp. 2611-2618. ISSN 0020-7136

Laplane, Lucie and Duluc, Dorothée and Larmonier, Nicolas and Pradeu, Thomas and Bikfalvi, Andreas (2018) The Multiple Layers of the Tumor Environment. Trends in Cancer, 4 (12). pp. 802-809. ISSN 24058033

Laplane, Lucie and Mantovani, Paolo and Adolphs, Ralph and Chang, Hasok and Mantovani, Alberto and McFall-Ngai, Margaret and Rovelli, Carlo and Sober, Elliott and Pradeu, Thomas (2019) Why science needs philosophy. Proceedings of the National Academy of Sciences, 116 (10). pp. 3948-3952.

Lee, Jong Gwan and McShea, Daniel W. (2020) Operationalizing Goal Directedness: An Empirical Route to Advancing a Philosophical Discussion. Philosophy, Theory, and Practice in Biology, 12 (005). ISSN 2475-3025

Lemoine, Maël and Pradeu, Thomas (2018) Dissecting the Meanings of “Physiology” to Assess the Vitality of the Discipline. Physiology, 33 (4). pp. 236-245. ISSN 1548-9213

Liu, Katherine E (2017) Rethinking Causation in Cancer with Evolutionary Developmental Biology. Biological Theory.

Ludwig, David (2018) Does Cognition Still Matter in Ethnobiology? Ethnobiology Letters.

Ludwig, David and Weiskopf, Dan (2019) Ethnoontology: Ways of world‐building across cultures. Philosophy Compass.

Malaterre, Christophe (2013) Microbial diversity and the “lower-limit” problem of biodiversity. Biology and Philosophy, 28. pp. 219-239.

Martínez, Sergio F. (2019) What is innovation? New lessons from biology. THEORIA. An International Journal for Theory, History and Foundations of Science, 34 (3). pp. 343-355. ISSN 2171-679X

Militello, Guglielmo and Bich, Leonardo and Moreno, Alvaro (2020) Functional Integration and Individuality in Prokaryotic Collective Organisations. Acta Biotheoretica. ISSN 0001-5342

Millstein, Roberta L. (2012) Darwin's Explanation of Races by Means of Sexual Selection. Studies in History and Philosophy of Biological and Biomedical Sciences, 43. pp. 627-633. ISSN 1369-8486

Millstein, Roberta L. (2015) Thinking about populations and races in time. Studies in History and Philosophy of Biological and Biomedical Sciences, 52. pp. 5-11. ISSN 1369-8486

Millstein, Roberta L. (2020) Defending a Leopoldian basis for biodiversity: a response to Newman, Varner, and Linquist. Biology & Philosophy, 35 (12). ISSN 1572-8404

Mitra, Piyali (2017) Philosophical Ruminations about Embryo Experimentation with Reference to Reproductive Technologies in Jewish “Halakhah”. IAFOR Journal of Ethics, Religion & Philosophy, 3 (2). ISSN 21870624

Moreno, Alvaro and Suárez, Javier (2020) Plurality of explanatory strategies in biology: Mechanisms and Networks. Methodological Prospects for Scientific Research. pp. 141-165.

Mossio, Matteo and Bich, Leonardo (2014) WHAT MAKES BIOLOGICAL ORGANISATION TELEOLOGICAL? Synthese. ISSN 1573-0964

Mossio, Matteo and Bich, Leonardo and Moreno, Alvaro (2013) Emergence, closure and inter-level causation in biological systems. Erkenntnis, 78 (2). pp. 153-178. ISSN 0165-0106

Nathan, Marco J. (2018) Pluralism is the Answer! What is the Question? Philosophy, Theory, and Practice in Biology, 11 (015). ISSN 2475-3025

O'Connor, Cailin (2014) The Evolution of Vagueness. Erkenntnis, 79 (4). pp. 707-727. ISSN 0165-0106

O'Connor, Cailin (2015) Evolving Perceptual Categories. Philosophy of Science, 81 (5). pp. 110-121.

Osimani, Barbara (2014) Causing something to be one way rather than another: Genetic Information, causal specificity and the relevance of linear order. Kybernetes, 43 (6). pp. 865-881.

Osimani, Barbara (2014) Hunting side effects and explaining them: should we reverse evidence hierarchies upside down? Topoi. Topoi, 33. pp. 295-312.

Papale, François (2020) Compte Rendu De Rencontres De Venise – Regards Sur l’épistémologie à l’intention Des Curieux En Sciences Du Vivant. Boudjeltia Et Vanhaeberbeek (dir.), Hermann Éditeurs, Paris, 2019. Lato Sensu, revue de la Société de philosophie des sciences, 7 (2). pp. 7-11. ISSN 2295-8029

Park, Seungbae (2013) An Evolutionary Account of Cyclic Shifts in Women’s Mate Preferences.

Parke, Emily C. (2014) Experiments, Simulations, and Epistemic Privilege. Philosophy of Science, 81 (4). pp. 516-536.

Pedroso, Makmiller (2018) Forming Lineages by Sticking Together. Philosophy, Theory, and Practice in Biology, 11 (016). ISSN 2475-3025

Plutynski, A (2015) William Provine (1942-2015). Philosophy and Theory in Biology, 7. ISSN 1949-0739

Pontarotti, Gaëlle (2016) Extended inheritance as reconstruction of extended organization: the paradigmatic case of symbiosis. Lato Sensu, revue de la Société de philosophie des sciences, 3 (1). pp. 93-102. ISSN 2295-8029

Pradeu, Thomas (2019) Immunology and individuality. eLife, 8. ISSN 2050-084X

Pradeu, Thomas (2016) Organisms or biological individuals? Combining physiological and evolutionary individuality. Biology and Philosophy, 31 (6). pp. 797-817.

Pradeu, Thomas (2016) The many faces of biological individuality. Biology and Philosophy, 31 (6). pp. 761-773.

Pradeu, Thomas and Du Pasquier, Louis (2018) Immunological memory: What's in a name? Immunological Reviews, 283 (1). pp. 7-20. ISSN 01052896

Quinn, Aleta (2019) Diagnosing Discordance: Signal in Data, Conflict in Paradigms. Philosophy, Theory, and Practice in Biology, 11 (017). ISSN 2475-3025

Raerinne, Jani and Baedke, Jan (2015) Exclusions, Explanations, and Exceptions: On the Causal and Lawlike Status of the Competitive Exclusion Principle. Philosophy and Theory in Biology, 7. ISSN 1949-0739

Ramsey, Grant (2015) The Causal Structure of Evolutionary Theory. Australasian Journal of Philosophy.

Ramsey, Grant and Durand, Pierre (2019) The Nature of Programmed Cell Death. Biological Theory, 14. pp. 30-41. ISSN 1555-5550

Roughgarden, Joan (2019) Holobiont Evolution: Mathematical Model with Vertical vs. Horizontal Microbiome Transmission. Philosophy, Theory, and Practice in Biology, 12 (002). ISSN 2475-3025

Rubin, Hannah (2018) The Debate over Inclusive Fitness as a Debate over Methodologies. Philosophy of Science, 85 (1). pp. 1-10. ISSN 2365-4228

Rubin, Hannah (2015) Genetic Models in Evolutionary Game Theory: The Evolution of Altruism. Erkenntnis, 80 (6). pp. 1175-1189. ISSN 1572-8420

Rubin, Hannah (2016) The phenotypic gambit: selective pressures and ESS methodology in evolutionary game theory. Biology & Philosophy, 31 (4). pp. 551-569. ISSN 1572-8404

Räz, Tim (2013) On the Application of the Honeycomb Conjecture to the Bee’s Honeycomb. Philosophia Mathematica, 21 (3). pp. 351-360.

Scholl, Raphael (2013) Causal inference, mechanisms, and the Semmelweis case. Studies in History and Philosophy of Science, 44 (1). pp. 66-76.

Sober, Elliott (2019) Fitness and the Twins. Philosophy, Theory, and Practice in Biology, 12 (001). ISSN 2475-3025

Sterrett, S. G. (2013) The Morals of Model-Making. Studies in History and Philosophy of Science .

Suárez, Javier (2018) The importance of symbiosis in philosophy of biology: an analysis of the current debate on biological individuality and its historical roots. Symbiosis, 76 (2). pp. 77-96.

Suárez, Javier (2020) The stability of traits conception of the hologenome: An evolutionary account of holobiont individuality. History and Philosophy of the Life Sciences, 42 (11).

Suárez, Javier and Stencel, Adrian (2020) A part‐dependent account of biological individuality: why holobionts are individuals and ecosystems simultaneously. Biological Reviews of the Cambridge Philosophical Society, 95. pp. 1308-1324.

Suárez, Javier and Triviño, Vanessa (2020) What Is a Hologenomic Adaptation? Emergent Individuality and Inter-Identity in Multispecies Systems. Frontiers in Psychology, 11 (187). ISSN 1664-1078

Suárez, Javier and Triviño, Vanessa (2019) A metaphysical approach to holobiont individuality: Holobionts as emergent individuals. Quaderns de Filosofia, 6 (1). pp. 59-76.

Tahko, Tuomas E. (2018) Where Do You Get Your Protein? Or: Biochemical Realization. British Journal for the Philosophy of Science. ISSN 1464-3537

Triviño, Vanessa and Suárez, Javier (2020) Holobionts: Ecological communities, hybrids, or biological individuals? A metaphysical perspective on multispecies systems. Studies in the History and Philosophy of Science Part C.

Truchetet, Marie-Elise and Pradeu, Thomas (2018) Re-thinking our understanding of immunity: Robustness in the tissue reconstruction system. Seminars in Immunology, 36. pp. 45-55. ISSN 10445323

Weber, Marcel (2017) How Objective Are Biological Functions? Synthese. pp. 1-17. ISSN 1573-0964

Winning, Jason (2018) Mechanistic Causation and Constraints: Perspectival Parts and Powers, Non-Perspectival Modal Patterns. British Journal for the Philosophy of Science. ISSN 1464-3537

Woodward, James (2014) From Handles to Interventions: Commentary on R.G. Collingwood, “The So-Called Idea of Causation”. International Journal of Epidemiology. pp. 1-6.

Other

Earley, Joseph (2008) Process Structural Realism, Instance Ontology, and Societal Order. UNSPECIFIED.

Grandpierre, Attila (2003) The Dynamics of Time and Timelessness: Philosophy, Physics and Prospects for our Life. UNSPECIFIED.

Merlin, Francesca (2007) On Griffiths and Gray's concept of expanded and diffused inheritance. UNSPECIFIED.

Wilkins, John S. and Nelson, Gareth J. (2008) Trémaux on species: A theory of allopatric speciation (and punctuated equilibrium) before Wagner. UNSPECIFIED.

Wilson, Jessica Metaphysical Emergence: Weak and Strong. unpublished stable ms..

This list was generated on Tue Jan 19 10:23:23 2021 EST.