A

Aaby, Bendik and Ramsey, Grant (2019) Three Kinds of Niche Construction. The British Journal for the Philosophy of Science. ISSN 1464-3537

B

Bausman, William (2018) ¬¬¬¬Modeling: Neutral, Null, and Baseline. [Preprint]

Bausman, William / C and Halina, Marta (2018) Not Null Enough: Pseudo-Null Hypotheses in Community Ecology and Comparative Psychology. [Preprint]

Bocking, Stephen (2007) Wild or Farmed? Seeking Effective Science in a Controversial Environment. Spontaneous Generations: A Journal for the History and Philosophy of Science, 1 (1). pp. 48-57. ISSN 1913 0465

Botero, Maria (2009) More than Designing an Ethogram, The Implications of Choosing a Methodology in Primatology. In: UNSPECIFIED.

Brown, Harvey R. The theory of the rise of sap in trees: some historical and conceptual remarks. Springer, Basel.

C

Currie, Adrian (2018) Big Dragons on Small Islands: generality and particularity in science. (review of Angela Potochnik's Idealization and the Aims of Science). [Preprint]

Currie, Adrian (2018) Bottled Understanding: the role of lab-work in ecology. [Preprint]

D

Desjardins, Eric and Donhauser, Justin and Barker, Gillian (2018) Ecological Historicity, Functional Goals, and Novelty in the Anthropocene. Environmental Values.

Deulofeu, Roger and Suárez, Javier (2018) When Mechanisms Are Not Enough: The Origin of Eukaryotes and Scientific Explanation. Philosophy of Science, 9. pp. 95-115. ISSN 2365-4228

Deulofeu, Roger and Suárez, Javier and Pérez-Cervera, Alberto (2019) Explaining the behaviour of random ecological networks. The stability of the microbiome as a case of integrative pluralism. [Preprint]

Donhauser, Justin (2017) Differentiating and defusing theoretical Ecology's criticisms: A rejoinder to Sagoff's reply to Donhauser (2016). Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences, 63 (Supple). 70 - 79.

Donhauser, Justin (2016) Making Ecological Values Make Sense: Toward More Operationalizable Ecological Legislation. Ethics and the Environment, 21 (2). pp. 1-25.

Donhauser, Justin (2016) Theoretical ecology as etiological from the start. Studies in History and Philosophy of Science Part C: Studies in History and Philosophy of Biological and Biomedical Sciences, 60. 67 - 76.

E

Elliott, Kevin and McKaughan, Daniel (2013) Non-Epistemic Values and the Multiple Goals of Science. [Preprint]

Elliott, Steve (2019) Research Problems. The British Journal for the Philosophy of Science. ISSN 0007-0882

Elliott-Graves, Alkistis (2020) The Future of Predictive Ecology. [Preprint]

Elliott-Graves, Alkistis (2018) Generality and Causal Interdependence in Ecology. [Preprint]

Elliott-Graves, Alkistis (2020) The Value of Imprecise Prediction. [Preprint]

Elliott-Graves, Alkistis (2020) What is a Target System? [Preprint]

F

Fenton-Glynn, Luke (2014) Ceteris Paribus Laws and Minutis Rectis Laws. In: UNSPECIFIED.

H

Havstad, Joyce C (2019) Let Me Tell You ‘Bout the Birds and the Bee-Mimicking Flies and Bambiraptor. [Preprint]

J

Jones, Elis (2021) Distinguishing regeneration from degradation in coral ecosystems: the role of value. [Preprint]

Justus, James (2006) Ecological and Lyapunov Stability. In: UNSPECIFIED.

Justus, James (2004) Qualitative Scientific Modeling and Loop Analysis. In: UNSPECIFIED. (In Press)

Justus, James (2004) Qualitative Scientific Modeling and Loop Analysis. In: UNSPECIFIED. (In Press)

K

Kostic, Daniel and Hilgetag, Claus and Tittgemeyer, Marc (2020) Unifying the essential concepts of biological networks: biological insights and philosophical foundations. [Preprint]

Kostyrka, Gladys (2015) Disease ecology and the concept of emerging infectious disease: its impact on the epidemiology of rabies virus, 1990s-2010s. [Preprint]

Kostyrka, Gladys (2015) Interspecies transmission and viral epidemics: integration of molecular and ecological approaches in the epidemiology of two RNA viruses (1989-2010s). [Preprint]

L

Lean, Christopher (2019) Can Communities Cause? [Preprint]

Lean, Christopher (2020) General Unificatory Theories in Community Ecology. [Preprint]

Lean, Christopher (2016) Indexically Structured Ecological Communities. In: UNSPECIFIED.

Lean, Christopher (2018) Indexically Structured Ecological Communities (Phil sci Published). [Preprint]

Lean, Christopher (2020) Invasive Species and Natural Function in Ecology. [Preprint]

Lean, Christopher (2017) Preserving the Tree of Life. [Preprint]

Linquist, Stefan (2015) Against Lawton’s contingency thesis, or, why the reported demise of community ecology is greatly exaggerated. In: UNSPECIFIED.

Linquist, Stefan and Cottenie, Karl and Elliott, Tyler and Saylor, Brent and Kremer, Stefan and Gregory, T. Ryan (2015) Applying ecological models to communities of genetic elements: the case of neutral theory. [Preprint]

Linquist, Stefan and Saylor, Brent and Cottenie, Karl and Elliott, Tyler A. and Kremer, Stefan C. and Gregory, T. Ryan (2013) Distinguishing ecological from evolutionary approaches to transposable elements. [Preprint]

Ludwig, David (2018) Does Cognition Still Matter in Ethnobiology? Ethnobiology Letters.

Ludwig, David and El-Hani, Charbel (2019) Philosophy of Ethnobiology: Understanding Knowledge Integration and Its Limitations. [Preprint]

Ludwig, David and Poliseli, Luana (2018) Relating traditional and academic ecological knowledge: mechanistic and holistic epistemologies across cultures. Biology & Philosophy, 33 (43). ISSN 1572-8404

M

Millstein, Roberta L. (2013) Environmental Ethics. [Preprint]

Millstein, Roberta L. (2012) Exploring the Status of Population Genetics: The Role of Ecology. [Preprint]

Millstein, Roberta L. (2014) How the Concept of 'Population' Resolves Concepts of 'Environment'. In: UNSPECIFIED.

Millstein, Roberta L. (2015) Is Aldo Leopold's 'Land Community' an Individual? In: UNSPECIFIED.

Millstein, Roberta L. (2015) Re-examining the Darwinian Basis for Aldo Leopold’s Land Ethic. [Preprint]

Millstein, Roberta L. (2014) Types of Experiments and Causal Process Tracing: What Happened on the Kaibab Plateau in the 1920s? In: UNSPECIFIED.

Millstein, Roberta L. (2017) Debunking Myths About Aldo Leopold’s Land Ethic. [Preprint]

Millstein, Roberta L. (2020) Defending a Leopoldian basis for biodiversity: a response to Newman, Varner, and Linquist. Biology & Philosophy, 35 (12). ISSN 1572-8404

Millstein, Roberta L. (2019) Functions and Functioning in Aldo Leopold’s Land Ethic and in Ecology. [Preprint]

Millstein, Roberta L. (2016) Is Aldo Leopold's ‘Land Community’ an Individual? [Preprint]

Millstein, Roberta L. (2019) Types of Experiments and Causal Process Tracing: What Happened on the Kaibab Plateau in the 1920s. [Preprint]

Millstein, Roberta L. (2017) Understanding Leopold’s Concept of ‘Interdependence’ for Environmental Ethics and Conservation Biology. In: UNSPECIFIED.

Mitchell, Sandra D. (2000) The Import of Uncertainty. [Preprint]

Munoz, François and huneman, philippe (2016) From the neutral theory to a comprehensive and multiscale theory of ecological equivalence. [Preprint]

O

O'Malley, Maureen A. and Parke, Emily C. (2018) Microbes, mathematics, and models. [Preprint]

P

Panebianco, Fabrizio and Serrelli, Emanuele (2013) Eco-phenotypic physiologies: a new kind of modeling for unifying evolution, ecology and cultural transmission. In: UNSPECIFIED.

Pernu, Tuomas K. and Helanterä, Heikki (2019) Social evolution and the two elements of causation. Oikos, 128. pp. 905-911.

Plutynski, A (2008) "Ecology and the Environment". Oxford Handbook in Philosophy of Biology.

Poliseli, Luana (2020) The emergence of scientific understanding in current ecological research practice. [Preprint]

Powers, Jack (2014) Atrazine Research and Criteria of Characterizational Adequacy. In: UNSPECIFIED.

Pradeu, Thomas and Kostyrka, Gladys and Dupré, John (2016) Understanding viruses: Philosophical investigations. Studies in history and philosophy of biological and biomedical sciences. ISSN 1879-2499

Pradeu, Thomas (2016) The many faces of biological individuality. Biology and Philosophy, 31 (6). pp. 761-773.

R

Raerinne, Jani and Baedke, Jan (2015) Exclusions, Explanations, and Exceptions: On the Causal and Lawlike Status of the Competitive Exclusion Principle. Philosophy and Theory in Biology, 7. ISSN 1949-0739

Ross, Lauren N. (2018) Causal concepts in biology: How pathways differ from mechanisms and why it matters. [Preprint]

Roughgarden, Joan (2012) Individual Based Models in Ecology: An Evaluation, or How Not to Ruin a Good Thing. In: UNSPECIFIED.

Räz, Tim (2016) The Volterra Principle Generalized. [Preprint]

S

Sarkar, Sahotra (2001) Defining 'Biodiversity'; Assessing Biodiversity. [Preprint]

Scholl, Raphael and Räz, Tim (2013) Modeling causal structures: Volterra's struggle and Darwin's success. European Journal for Philosophy of Science, 3 (1). pp. 115-132. ISSN 1879-4912

Scholl, Raphael (2016) Spot the difference: Causal contrasts in scientific diagrams. [Preprint]

Shavit, Ayelet (2014) You Can't Go Home Again - or Can you? 'Replication' Indeterminacy and 'Location' Incommensurability in Three Biological Re-Surveys. In: UNSPECIFIED.

Steen, David, A. and Barrett, Kyle and Clarke, Ellen and Guyer, Craig (2017) Conceptualizing Communities as Natural Entities: A Philosophical Argument with Basic and Applied Implications. [Preprint]

Suárez, Javier (2016) Bacterial species pluralism in the light of medicine and endosymbiosis. THEORIA. An International Journal for Theory, History and Foundations of Science, 31 (1). pp. 91-105. ISSN 0495-4548

Suárez, Javier (2018) The importance of symbiosis in philosophy of biology: an analysis of the current debate on biological individuality and its historical roots. Symbiosis, 76 (2). pp. 77-96.

Suárez, Javier (2020) The stability of traits conception of the hologenome: An evolutionary account of holobiont individuality. History and Philosophy of the Life Sciences, 42 (11).

Suárez, Javier and Stencel, Adrian (2020) A part‐dependent account of biological individuality: why holobionts are individuals and ecosystems simultaneously. Biological Reviews of the Cambridge Philosophical Society, 95. pp. 1308-1324.

Suárez, Javier and Triviño, Vanessa (2019) A metaphysical approach to holobiont individuality: Holobionts as emergent individuals. Quaderns de Filosofia, 6 (1). pp. 59-76.

T

Tauber, Alfred I. (2016) Immunity in Context: Science and Society in Dialogue. THEORIA. An International Journal for Theory, History and Foundations of Science, 31 (2). pp. 207-224. ISSN 2171-679X

Turner, Derek (2019) In Defense of Living Fossils. [Preprint]

W

Weisberg, Michael and Reisman, Kenneth (2008) The Robust Volterra Principle. [Preprint]

Wilson, Brad (2009) Experiments in Ecology and Evolutionary Biology. In: UNSPECIFIED.

Wilson, Brad (2009) From Laws to Models and Mechanisms: Ecology in the Twentieth Century. In: UNSPECIFIED.

Z

Zhang, Mingjun (2020) The use and limitations of null-model-based hypothesis testing. Biology & Philosophy, 35 (2). pp. 1-22. ISSN 0169-3867